Function reference • TFactSR

All functions
`AtCatalog`	A list of TF-target genes (TG) in Arabidopsis thaliana.
`DEGs`	An example list of DEGs from DEMO data in TFactS.
`DEGs39`	An example list of 39 DEGs from DEMO data in TFactS.
`FASTcalculateRC()`	calculates Random Control (RC) fastly?
`GenesUp_SH1H`	An example list of 74 DEGs from AtGenExpress stress dataset.
`TFactSR`	TFactSR: A package for identifying critical transcription factors.
`calculateEnrichmentTest()`	performs enrichment analysis
`calculateEvalue()`	calculates E-value
`calculateFDRBH()`	calculates FDR by Benjamini and Hochberg method
`calculateQvalue()`	calculates Q-value
`calculateRC()`	calculates Random Control (RC)
`calculateTFactS()`	calculates TFactS
`catalog`	A list of TF-target genes (TG) in TFactS.
`example.df`	An example result of enrichment analysis
`example.list`	An example list of result of enrichment analysis
`extractTFTG()`	extracts transcription factor (TF) and target gene (TG) information
`formatET()`	formats the result of enrichment test (ET)
`formatRC()`	formats the result of Random Control (RC)

Reference